Is It a Mammal, a Bird or a Fish?
From simple yes-or-no traits like hair, feathers, eggs, milk and number of legs, which class does this animal belong to? It's a friendly first table for seeing how a model reasons from examples.
The table
101 animals with 16 traits such as hair, feathers, eggs, milk, fins and legs, and their class. It's in Welt's research catalogue as Zoo Animal Types, 101 rows by 17 columns, licensed CC BY 4.0. The catalogue measures its signal at 0.83. At 101 rows and 16 features, TabICLv2, Kumo Tabular Medium, Mitra-v2 and TabDPT 1.3 take the table as it is.
Walkthrough
Load it from the catalogue
Find the table, read its recorded target and print the column names.
import pandas as pd from welt import Client with Client() as client: item = client.research_datasets(q="zoo animal", limit=1)["items"][0] info = client.research_dataset(item["id"]) data = client.load_research_dataset(item["id"]) target = info["targets"][0] target = target["name"] if isinstance(target, dict) else target print([column["name"] for column in info["schema"]], target)Pick the rows
Set aside 20 rows to predict at the end, and keep the rest for the models to learn from.
known = data.dropna(subset=[target]) new_rows = known.sample(20, random_state=1) table = known.drop(new_rows.index)Compare the models and predict
The models compete on the same folds against a simple guess, then the top-ranked one is fitted on the whole table. ROC AUC runs from 0.5, a coin toss, to 1, a perfect ranking, and a lower Brier score means the probabilities can be trusted more. The last table puts each prediction next to the real answer.
with Client() as client: evaluation = client.evaluate(table, target, task="classification", seed=7, models=["tabicl-v2", "kumo-medium", "mitra-v2", "tabdpt-1.3"]) model = evaluation.fit() print(evaluation.summary()[["name", "rank", "roc_auc_mean", "brier_mean"]]) features = new_rows.drop(columns=target) print(pd.DataFrame({"actual": new_rows[target].values, "predicted": model.predict(features), "probability": model.predict_proba(features).max(axis=1)}))
What you get
Try it
Use Open with to run the research datasets notebook in Colab, Kaggle or Jupyter and search for "zoo animal", or run the code above after pip install "welt-client[parquet]".
Open with
- Type
- Use case
- Area
- Biology
- Question
- Is It a Mammal, a Bird or a Fish?
- Model
- TabICLv2, Kumo Tabular Medium, Mitra-v2, TabDPT 1.3
- Data
- Zoo Animal Types, 101 rows
- For
- Teachers, students and anyone new to machine learning
- Licence
- CC BY 4.0